Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900242.1_cds_XP_016450299.1_44764
CDS Infomation

[gene=LOC107775129] [db_xref=GeneID:107775129] [protein=pectate lyase-like] [protein_id=XP_016450299.1] [location=join(19868..20055,20488..21139,21238..21480,21610..21831)] [gbkey=CDS]
Sequence

ATGGGAACTCTCAAAAATAGATTGATTTTCTTTGTTTTAGTCACTCTAGTTTTAAGCATA
GAGGCAAATATTAGTGAGTTTGATGAGGTGTGGCAGACTCGAGCTACGCAAGCAAAGAAA
ACTGCTCAGGATTCCTATAATCCTCATCCTGAAACTGTCGCAGACAATCTCAACAAACAT
GTTCACAAGTGGGAAGAAGGTAGCAATAGCACAAGGAGAGACTTGCACAAGTACGATGGT
CCATGCATGTCTACTAACCCTATTGATCGTTGCTGGAGATGTGACCCAAACTGGGTTAAA
AACCGCATGAAGCTAGCTGATTGTGTTCTTGGATTCGGCCACCATACAACTGGTGGCAAA
GGTGGCAAAATCTACGTAGTAACTGACCCTTCGGACGACGATATGGTGAATCCTAAACCA
GGAACACTGCGCCACGCAGTCATACAACCAGAGCCACTTTGGATCATATTTAAACATCAC
ATGGTCATTAGGCTTAACCAGGAACTTATCATGACAAGCAACAAGACAATTGATGCCAGA
GGGCAAAAAGTACACATTGCCTTTGGTGCTAGTTTCATGTTACAGTTCATAAACAATGTC
ATTATTCATGGTCTTCATATCCATGATATTAAGGCTGGTAATGGTGGACTAATTAGAGAC
TCGATCAATCATTATGGTTTTCGATCAAGGAGTGATGGTGATGGTATTTCAATCTTTGGA
TCCACAAATATTTGGATTGATCATGTTTCCATGTCTAATTGTGATGATGGACTCATTGAT
GCTGTCCAGGCTTCAACTGCTATTACCATTTCCAACTGCCATTTCACTAACCATAATGAT
GTTATGTTGTTTGGAGCAAGTGATAGCTACTCGGAGGACTCAATTTTACAGATAACACTT
GCTTTTAATCACTTTGGACAAGGGTTGATCCAGAGGATGCCAAGAGTGAGATGGGGATTT
GTTCATGCAGTCAACAATGACTATACTCACTGGCTTATGTATGCAATTGGTGGAAGCCAA
CACCCCACCATCCTCAGCCAGGGCAACCGGTTCATCGCCCCGCCTAACCCTAATGCAAAG
GAGGTGACCAAAAGGGAGTATTCACCTGAAAGTGTGTGGAAGAATTGGGTGTGGAGATCA
CAGGGAGATCTGATGATGAACGGAGCGTTCTTTGTGGAATCTGGAAATCCCAATCATATA
TTCATGAAGGGTCCTGATATGATCCACCCCAGGCCAGGTTCATATGCAAGTAGGCTAACA
AGATTTTCAGGCTCTTTGAACTGCATTGAAGGGAAGCCTTGTTAA

Peptide Sequence

PEP ID

XP_016450299.1
PEP Infomation

PREDICTED: pectate lyase-like [Nicotiana tabacum]
Sequence

MGTLKNRLIFFVLVTLVLSIEANISEFDEVWQTRATQAKKTAQDSYNPHPETVADNLNKH
VHKWEEGSNSTRRDLHKYDGPCMSTNPIDRCWRCDPNWVKNRMKLADCVLGFGHHTTGGK
GGKIYVVTDPSDDDMVNPKPGTLRHAVIQPEPLWIIFKHHMVIRLNQELIMTSNKTIDAR
GQKVHIAFGASFMLQFINNVIIHGLHIHDIKAGNGGLIRDSINHYGFRSRSDGDGISIFG
STNIWIDHVSMSNCDDGLIDAVQASTAITISNCHFTNHNDVMLFGASDSYSEDSILQITL
AFNHFGQGLIQRMPRVRWGFVHAVNNDYTHWLMYAIGGSQHPTILSQGNRFIAPPNPNAK
EVTKREYSPESVWKNWVWRSQGDLMMNGAFFVESGNPNHIFMKGPDMIHPRPGSYASRLT
RFSGSLNCIEGKPC

Transcript Sequence

Gene sequence data has not been registered.